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This book shows biologists with little or no programming experience how to use Perl, the ideal language for biological data analysis. Each chapter focuses on solving a particular problem or class of problems, so you'll finish the book with a solid understanding of Perl basics, a collection of programs for such tasks as parsing BLAST and GenBank, and the skills to tackle more advanced bioinformatics programming.This book is suitable for use as a classroom textbook, for self-study, and as a  » Read more...

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This book shows biologists with little or no programming experience how to use Perl, the ideal language for biological data analysis. Each chapter focuses on solving a particular problem or class of problems, so you'll finish the book with a solid understanding of Perl basics, a collection of programs for such tasks as parsing BLAST and GenBank, and the skills to tackle more advanced bioinformatics programming.This book is suitable for use as a classroom textbook, for self-study, and as a reference.The book covers:- Programming basics and working with DNA sequences and strings;- Debugging your code;- Simulating gene mutations using random number generators;- Regular expressions and finding motifs in data;- Arrays, hashes, and relational databases;- Regular expressions and restriction maps;- Using Perl to parse PDB records, annotations in GenBank, and BLAST output.